Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MWLVIMIIHNKARFLCCSKLLEKFYSFLVTRIKKRGIFFIK
2OD6 Chain:A ((68-85))
--------KDRASFEANIAYLEDTFG---------------
General information:
TITO was launched using:
RESULT:
Template:
2OD6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2150 for 68 contacts (-31.6/contact) +
2D Compatibility (PS) -2006 + (NN) -1216 + (LL) 3200
1D Compatibility (HY) 0 + (ID) 200
Total energy: -2372.0 ( -34.88 by residue)
QMean score : 0.288
(partial model without unconserved sides chains):
PDB file :
Tito_2OD6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OD6-query.scw
PDB file :
Tito_Scwrl_2OD6.pdb
: