Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKLNMNNEIKKVEQRLEKAIKSKDSVLEQASLHLLSSGGKRVRPAFVILSSQFGKDEQTSEQTYQVAVALELIHMATLVHDDVIDKSDKRRGKLTISKKWDQTTAILTGNFLLALGLEHLMAVKDNRVHQLISESIVDVCR--GELF--QFQDQFNSQQT--IINYLRRINRKTALLIQISTEVGAITSQSDKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKKLGKPVGSDLLNGHITLPILLEMRKNPDFKLKIEQLRRDSERKEFEECIQIIRKSDSIDEAKAVSSKYLSKALNLISELPDGHPKSLLLSLTKKMGSRNT |
| 3Q2Q Chain:A ((40-276)) | -----INDAMVQVEELLHTELSSGEDFLVDIVMHLTRAGGKRFRPMFALLASEFGE-KPLSENVIKAAVVVEITHLATLYHDDVMDEA-------SANARWDNSVAILAGDILLA----HASGL----MSQLGTDTVAHFAETFGELVTGQMRETVGPRDTDPIEHYTNVIREKTGVLIASAGYLGAMHAGAAPEHIDALKNFGAAVGMIFQIVDDIIDIFSETH----TPGTDLREGVFTLPVLYALRED-------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3Q2Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -76902 for 1617 contacts (-47.6/contact) +
2D Compatibility (PS) -23624 + (NN) -13007 + (LL) 6016
1D Compatibility (HY) -18800 + (ID) 4050
Total energy: -130367.0 ( -80.62 by residue)
QMean score : 0.382
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