Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKILFQEIINKAIEMKASDVHFIP-----VKNEVSIKFRINDNLEQYEQIGNSIYQKLLVYMKFQAGLDVSTQQVAQSGRYSYHFNKIYFLRI-STLPLSLGQESCVIRIVPQFFQQQKSTYKFNDFKHLMNKKQGLLLFSGPTGSGKSTLMYQMVSYANKALNLNVISIEDPVEMQIPGIVQINVNDKAGIN---YVNSFKAILRCDPDVILIGEIRDKDVAKCVIQASLSGHLVLTTLHATDCKGAILRLLEM-GISVQELIQAT-----NLIINQRLVTTIKQQRQLVCEILSQQQLRYFFSHNHSLPSSFKNLEDKLDDMTKAGVICETTMDKYI |
| 2GSZ Chain:A ((2-292)) | LKIL--EIIKEAIELGASDIHLTAGAPPAVRIDGYIKF-----LKDFPRLTPEDTQKL----AYSVMSEKHRQKLEENGQVDFSFGVRGVGRFRANVFYQRGSVAAALRSLPAEIPEFKKLGLPDKVLELCHRKMGLILVTGPTGSGKSTTIASMIDYINQTKSYHIITIEDPIEYVFKHKKSIVNQREVGEDTKSFADALRAALREDPDVIFVGEMRDLETVETALRAAETGHLVFGTLHTNTAIDTIHRIVDIFPLNQQEQVRIVLSFILQGIISQRLLPKIGGGRVLAYELL-------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GSZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -155850 for 2024 contacts (-77.0/contact) +
2D Compatibility (PS) -29181 + (NN) -8054 + (LL) 3740
1D Compatibility (HY) -15600 + (ID) 4400
Total energy: -209345.0 ( -103.43 by residue)
QMean score : 0.357
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