Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKTVVRKNESLEDALRRFKRSVSKSGTIQEVRKREFYEKPSVKRKKKSEAARKRKFK
1Q9U Chain:A ((5-30))
-FHYTVDVSTGMNETIERLEESLKQEGFG-----------------------------
General information:
TITO was launched using:
RESULT:
Template:
1Q9U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3994 for 94 contacts (42.5/contact) +
2D Compatibility (PS) -3056 + (NN) -2923 + (LL) 2712
1D Compatibility (HY) -1600 + (ID) 200
Total energy: -1073.0 ( -11.41 by residue)
QMean score : 0.629
(partial model without unconserved sides chains):
PDB file :
Tito_1Q9U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Q9U-query.scw
PDB file :
Tito_Scwrl_1Q9U.pdb
: