Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKATTIIGIAGGSGSGKTTVTNEIMKNLEGHSVALLAQDYYYK----DQKHLTFDERLETNYDHPFAFDNDLLIENLKDLKNGKAVEVPTYDYASHTRSDITIDFKPKDVIIVEGIFALENKVLRDMMDVKIYVDTDADLRILRRLTRDTKERGRSMDSVINQYLSVVRPMHDQFIEPTKKYADIIIPEGGSNKVAIDIMTTKIQSLVSKQ
1UEI Chain:A ((24-232))
-----LIGVSGGTASGKSSVCAKIVQLL-QKQVVILSQDSFYRVLTSEQKAKALKGQF--NFDHPDAFDNELILKTLKEITEGKTVQIPVYDFVSHSRKEETVTVYPADVVLFEGILAFYSQEVRDLFQMKLFVDTDADTRLSRRVLRDISERGRDLEQILSQYITFVKPAFEEFCLPTKKYADVIIPRGADNLVAINLIVQHIQDILN--
General information:
TITO was launched using:
RESULT:
Template:
1UEI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -82042 for 1546 contacts (-53.1/contact) +
2D Compatibility (PS) -21386 + (NN) -9562 + (LL) 964
1D Compatibility (HY) -22000 + (ID) 4250
Total energy: -138276.0 ( -89.44 by residue)
QMean score : 0.485
(partial model without unconserved sides chains):
PDB file :
Tito_1UEI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UEI-query.scw
PDB file :
Tito_Scwrl_1UEI.pdb
: