Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKISTKGRYGLTLMISLAKKEGQGCISLKSIAEENNLSDLYLEQLVGPLRNAGLIRSVRGAKGGYQLRVPAEEISAGDIIRLLEGPITFVESIESEPPA--QKQLWIRMRDAVRDVLDNTTLKYLAEYVDTSEDLDGYMFYI
4HF2 Chain:A ((1-132))
MRLTSKGRYAVTAMLDVALNSEAGPVPLADISERQGISLSYLAQLFSRLRKNGLVSSVRGPGGGYLLGKDASSIAVGEVISAVDES-------------ALTHALWRDLSDRLTGFLNNIT---LGELVNN-----------
General information:
TITO was launched using:
RESULT:
Template:
4HF2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -68844 for 806 contacts (-85.4/contact) +
2D Compatibility (PS) -12013 + (NN) -3574 + (LL) 1892
1D Compatibility (HY) -11200 + (ID) 2100
Total energy: -95839.0 ( -118.91 by residue)
QMean score : 0.578
(partial model without unconserved sides chains):
PDB file :
Tito_4HF2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HF2-query.scw
PDB file :
Tito_Scwrl_4HF2.pdb
: