Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKVVVQRVKEA--SVTNDTLN---------NQIKKGYCLLVGIGQNSTEQDADVIAKKIANARLFEDDNNKLNFNIQQMNGEILSVSQFTLYADVKKGNRPGFSNSKNPDQAVKIYEYFNDALRAY--GLTVKTGEFGTHMNVSINNDGPVTIIYESQDGKIQ
3KO7 Chain:A ((1-159))
MRVVIQRVKGAILSVRKENIGENEKELEIISEIKNGLICFLGIHKNDTWEDALYIIRKCLNLRLWNNDNKTWDKNVKDLNYELLIVSQFTLFGNTKKGNKPDFHLAKEPNEALIFYNKIIDEFKKQYNDDKIKIGKFGNYMNIDVTNDGPVTIYIDTHD----
General information:
TITO was launched using:
RESULT:
Template:
3KO7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56038 for 1029 contacts (-54.5/contact) +
2D Compatibility (PS) -16386 + (NN) -8512 + (LL) 216
1D Compatibility (HY) -15200 + (ID) 3050
Total energy: -98970.0 ( -96.18 by residue)
QMean score : 0.547
(partial model without unconserved sides chains):
PDB file :
Tito_3KO7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KO7-query.scw
PDB file :
Tito_Scwrl_3KO7.pdb
: