Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MITVDITVNDEGKVTDVIMDGHADHGEYGHDIVCAGASAVLFGSVNAIIGLTSERPDINYDDNGGHFHIRSVDTNNDEAQLILQTMLVSLQTIEEEYNENIRLNYK
1R4Q Chain:A ((197-247))
---VDLTLN-WGRLSSVLPDYH------GQDSVRVGR--ISFGSINAILG--------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1R4Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22914 for 191 contacts (-120.0/contact) +
2D Compatibility (PS) -3956 + (NN) 845 + (LL) 3996
1D Compatibility (HY) -3200 + (ID) 950
Total energy: -26179.0 ( -137.06 by residue)
QMean score : -0.003
(partial model without unconserved sides chains):
PDB file :
Tito_1R4Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1R4Q-query.scw
PDB file :
Tito_Scwrl_1R4Q.pdb
: