Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNECAFGTKDPVYLNYHDHVWGQPLYDSKALFKLLALESQHAGLSWLTILKKKEAYEEAFYDFEPEKVAQMTAQDIDRLMTFPNIVHHRKKLEAIVNQAQGYLKIEQAYGSFSKFLWSYVNGKPKDLQYEHASDRITVDDTATQLSKDLKQYGFKFLGPVTVFSFLEAAGLYDAHLKDCPSKPKHN
2OFI Chain:A ((3-183))
--RCDWVSQDPLYIAYHDNEWGVPETDSRKLFEMICLEGQQAGLSWITVLKKRENYRACFHQFDPIRIAAMQEEDVERLLQNTGIIRHRGKIQAIISNARAWLAMEQNGESFADFVWSFVDGQPQITQAASLDKIPTSTPASDALAKALKKRGFKFVGTTICYSFMQACGLVNDHITGCFCHP---
General information:
TITO was launched using:
RESULT:
Template:
2OFI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -80869 for 1407 contacts (-57.5/contact) +
2D Compatibility (PS) -19555 + (NN) -11133 + (LL) 156
1D Compatibility (HY) -16000 + (ID) 3650
Total energy: -131051.0 ( -93.14 by residue)
QMean score : 0.563
(partial model without unconserved sides chains):
PDB file :
Tito_2OFI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OFI-query.scw
PDB file :
Tito_Scwrl_2OFI.pdb
: