Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIVKVHICFVVKTASGYCYL---NKREAQAAI
2I2Y Chain:A ((10-29))
-----------KTLKGETTTEAVDAATAEKV-
General information:
TITO was launched using:
RESULT:
Template:
2I2Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 878 for 43 contacts (20.4/contact) +
2D Compatibility (PS) -1680 + (NN) 289 + (LL) 1884
1D Compatibility (HY) 1600 + (ID) 200
Total energy: 2771.0 ( 64.44 by residue)
QMean score : 0.589
(partial model without unconserved sides chains):
PDB file :
Tito_2I2Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2I2Y-query.scw
PDB file :
Tito_Scwrl_2I2Y.pdb
: