Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPELPEVEHVKRGIEPYVINQKIEHV-IFSDKVIEGKAQGKETIIKGIELDTFKTLSEGYTITNVERRSKYIVFQLDNKREQRTLISHLGMAGGFFIVDELEDIMIPNYRKHWHVIFELSNDKKLIYSDIRRFGEIRNVAS--VASYPSFLEIAPEPFTNEALTYYLNRIHQQSNKNKPIKQVILDHKVIAGCGNIYACEALFRAGVLPDKKVKDLTHQQQEMVFYYVREVLEEGIKHGGTSISDYRHADGKTGEMQLHLNVYKQP--VCKVCGSQIETKIIATRNSHYCPVCQK |
| 1R2Y Chain:A ((2-274)) | -PQLPEVETIRRTLLPLIVGKTIEDVRIFWPNIIRHPRDS----------EAFAARMIGQTVRGLERRGKFLKFLLDRD----ALISHLRMEGRYAVASALEPL-----EPHTHVVFCFTDGSELRYRDVRKFGTMHVYAKEEADRRPPLAELGPEPLSPAFSPAVLAERAVKTKRS--VKALLLDQTVVAGFGNIYVDESLFRAGILPGRPAASLSSKEIERLHEEMVATIGEAVMKGGSTVRTYVNTQGEAGTFQHHLYVYGRQGNPCKRCGTPIEKTVVAGRGTHYCPRCQR |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1R2Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -122133 for 2247 contacts (-54.4/contact) +
2D Compatibility (PS) -28233 + (NN) -7980 + (LL) 1844
1D Compatibility (HY) -20400 + (ID) 4750
Total energy: -181652.0 ( -80.84 by residue)
QMean score : 0.406
|
|
|