Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKIGDISIHYLNGGNTKMDGGAMFGVVPKPLWSKQYNANERNQINLPTHPILIQTAQYNLIIDAGIG------NGKLSEKQLRNFGVDEESHIIADLANYNLTPKDIDYVLMTHMHFDHAAGLTDQAGHAIFENAIHVVQQDEWHEFIAPNIRSKSTYWDKNKGDYSNKLILFEKHFEPVPGIKMQHSGGHSFGHTIITIESQGDKAVHMGDIFPTTAHKNPLWVTAYDDYPMQSIREKERMIPYFIQQQYWFLFYHDENYFAVKYSDDGENIDAYILRETLVDNN |
2BR6 Chain:A ((33-190)) | -------------------------------------------LNLPVWCYLLETEEGPILVDTGMPESAVNN--------ILP-KMTEEDRIVNILKRVGYEPDDLLYIISSHLHFDHA------GGNGAFTNTPIIVQRTEYEAAL-----HREEYMKECILPHLNYKII-EGDYEVVPGVQLLYTPGHSPGHQSLFIKTEQSGSVLL---------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2BR6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -57906 for 1054 contacts (-54.9/contact) +
2D Compatibility (PS) -15164 + (NN) -5430 + (LL) 7616
1D Compatibility (HY) -12000 + (ID) 2050
Total energy: -84934.0 ( -80.58 by residue)
QMean score : 0.509
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