Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSETIFGKILTGEIPSFKVYEDDYVYAFLDISQVTKGHTLLIPKKASANIFETDEETMKHIGAALPKVANAIKRAFNPDGLNIIQNNGEFADQSVFHIHFHLIPRYENDIDGFGYKWETHEDILDNDAKQQIAEQIQAQF
3OMF Chain:A ((9-107))
---CIFCKIAQKQIPSTIVYEDDEIFAFKDINPIAPIHILVIPKQHIASLNEITEENEAFIGKVLYKVS-LIGKKECPEGYRVVNNIGEDAGQTVKHIHFHIL-------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3OMF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58040 for 678 contacts (-85.6/contact) +
2D Compatibility (PS) -10455 + (NN) -3135 + (LL) 2548
1D Compatibility (HY) -7200 + (ID) 2200
Total energy: -78482.0 ( -115.76 by residue)
QMean score : 0.491
(partial model without unconserved sides chains):
PDB file :
Tito_3OMF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OMF-query.scw
PDB file :
Tito_Scwrl_3OMF.pdb
: