Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMSNANNADNKQFFSKILNSIGAGVVIALVPNALLGEVLKIFKSGNEILELTYQLVILIQLFMAFIIGVLAAHQFKFNGAGAAIVGTSAMIGSGAVVYSNNSFMLKGIGDIINTSLVVIIACLIYMVLQNKLGSFELIILPVLVPIVSGGIGLITLPYIRKITQAIGNVIHSFTDLNPLLMSILISVAFSLLMVTPISLVAIATAISLNGLGSGAANLGIVAACVTFLFGSLRVNSIGVNAVLLIGAAKMMIPVYLKNLIISIPLTINGIITGIIAYVLQVKGTPLSAGFGYTGLVGPINAFNRMSGDPTMNIILLALGYFVIPFVSAFIVHELCKKFIPIYSNDIYKFEVPKQ
2YDV Chain:A ((55-142))-----------------------------------------------------------------------------------------------------------------------------------------------------VGVLAIPFAIAISTGFCAACHGCLFIACFVLVLTASSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFA----------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2YDV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -54489 for 435 contacts (-125.3/contact) +
2D Compatibility (PS) -8034 + (NN) 1279 + (LL) 21316
1D Compatibility (HY) -8400 + (ID) 1000
Total energy: -49328.0 ( -113.40 by residue)
QMean score : 0.163

(partial model without unconserved sides chains):
PDB file : Tito_2YDV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2YDV-query.scw
PDB file : Tito_Scwrl_2YDV.pdb: