Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYQQSSFKENLIHWFDENQREMPWRQTTNPYYIWLSEVMLQQTQVKTVIDYYHRFVERFPTVEVLSQASEDEVLKYWEGLGYYSRARNFHTAIKEVYDKYEGLVPKDPDQFKALKGVGPYTQAAVMSIAYNVPLATVDGNVFRVWSRLNDDYRDIKLQSTRKSYEQ---ELLPYVTTEAGTFNQAMMELGALICTPKNPLCLFCPVQENCEAFDKGTFEKLPVKSKNVSKKVIEQSVFLIRNNQGQYLLQKR-SEKLLHGMWQFPMFESEHARRK------MTEKIGHDIQPVETPIFELKHQFTHLTWKIKVYAA----SGAIN--IETLPDDMIWFNLSDRDQYTFPVPMSKIYQFING |
| 1RRQ Chain:A ((12-356)) | --PAREFQRDLLDWFARERRDLPWRKDRDPYKVWVSEVMLQQTRVETVIPYFEQFIDRFPTLEALADADEDEVLKAWEGLGYYSRVRNLHAAVKEVKTRYGGKVPDDPDEFSRLKGVGPYTVGAVLSLAYGVPEPAVNGNVMRVLSRLFLVTDDIAKCSTRKRFEQIVREIMAY--ENPGAFNEALIELGALVCTPRRPSCLLCPVQAYCQAFAEGVAEELPVKM----VKQVPLAVAVLADDEGRVLIRKRDSTGLLANLWEFPSCETDGADGKEKLEQMV----GLQVELTE-PIVSFEHAFSHLVWQLTVFPGRLVHGGPVEEPYRLAPEDEL-------KAYAFPVSHQRVWR---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RRQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -167528 for 2480 contacts (-67.6/contact) +
2D Compatibility (PS) -32819 + (NN) -5201 + (LL) 1632
1D Compatibility (HY) -34400 + (ID) 7650
Total energy: -245966.0 ( -99.18 by residue)
QMean score : 0.466
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