Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIVKTEEELQALKEIGYICAKVRNTMQAATKPGITTKELDNIAKE-LFEEYGAISAPIHDENFPGQTCISVNEEVAHGIPSK-RVIREGDLVNIDVSALKNGYYADTGISFVVGESDDPMKQKVCDVATMAFENAIAKVKPGTKLSNIGKAVHNTARQNDLKVIKNLTGHGVGLSLHEAPAHVLNYFDPKDKTLLTEGMVLAIEPFISSNASFVTEGKNEWAFETSDKSFVAQIEHTVIVTKDG-PILTTKIEEE |
| 4A6V Chain:A ((5-251)) | --IKTPEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRICNDYIVNEQHAVSACLGYHGYPKSVCISINEVVCHGIPDDAKLLKDGDIVNIDVTVIKDGFHGDTSKMFIVGKPT-IMGERLCRITQESLYLALRMVKPGINLREIGAAIQKFVEAEGFSVVREYCGHGIGRGFHEEP-QVLHYDSRETNVVLKPGMTFTIEPMVNAGKKEIRTMKDGWTVKTKDRSLSAQYEHTIVVTDNGCEILTLR---- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4A6V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -80933 for 2127 contacts (-38.1/contact) +
2D Compatibility (PS) -26889 + (NN) -11889 + (LL) 996
1D Compatibility (HY) -21600 + (ID) 4350
Total energy: -144665.0 ( -68.01 by residue)
QMean score : 0.565
|
|
|