Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDDIQKIKKELSELVERVDDVEILANETADHVLELREEHKQHHNELRESHKELKDKQDKVVDENLEQTKILNRIEERYQTQVDVAQKNEEKTL-AQNKWLVGAIWALVTIVMIAVITASITALLP
1F0L Chain:A ((209-293))
----------------------------------IRDKTKTKIESLKE-HGPIKNKMSESPNKTVSEEKAKQYLEEFHQTALEHPELSELKTVTGTNPVFAGANYAAWAVNVAQVIDS-------
General information:
TITO was launched using:
RESULT:
Template:
1F0L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 8199 for 444 contacts (18.5/contact) +
2D Compatibility (PS) -8564 + (NN) -1268 + (LL) 3780
1D Compatibility (HY) -1600 + (ID) 1050
Total energy: -503.0 ( -1.13 by residue)
QMean score : 0.465
(partial model without unconserved sides chains):
PDB file :
Tito_1F0L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1F0L-query.scw
PDB file :
Tito_Scwrl_1F0L.pdb
: