Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDEAKFVLLQLYSIYLGRIDEGMSKHSASYFGSDESSFNAFFLG---FNFEDYIDAVLELKHRDFVIASAEDGGFLEMALSREGIAYSESESKKDYKTLMGLIRDLKKLII
1SL4 Chain:A ((17-60))
---------------------------------------NCYFMSNSQRNWHDSITACKEVGAQLVVIKSAEEQNFLQLQSSR-----------------------------
General information:
TITO was launched using:
RESULT:
Template:
1SL4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12838 for 191 contacts (-67.2/contact) +
2D Compatibility (PS) -4272 + (NN) 468 + (LL) 4756
1D Compatibility (HY) -3600 + (ID) 800
Total energy: -16286.0 ( -85.27 by residue)
QMean score : 0.141
(partial model without unconserved sides chains):
PDB file :
Tito_1SL4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SL4-query.scw
PDB file :
Tito_Scwrl_1SL4.pdb
: