Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYKRLFISRVILIFALILVISTPNVLAESQPDPMPDDLHKSSEFTGTMGNMKYLYDDHYVSATKVKSVDKFLAHDLIYNISDKKLKNYDKVKTELLNEDLAKKYKDEVVDVYGSNYYVNCYFSSKDNVGKVTGGKTCMYGGITKHEGNHFDNGNLQNVLVRVYENKRNTISFEVQTDKKSVTAQELDIKARNFLINKKNLYEFNSSPYETGYIKFIENNGNTFWYDMMPAPGDKFDQSKYLMMYNDNKTVDSKSVKIEVHLTTKNG
1UNS Chain:A ((1-236))
---------------------------ESQPDPTPDELHKSSEFTGTMGNMKYLYDDHYVSATKVMSVDKFLAHDLIYNISDKKLKNYDKVKTELLNEDLAKKYKDEVVDVYGSNYYVNCYFSSKDNVGKVTGGKTCMYGGITKHEGNHFDNGNLQNVLIRVYENKRNTISFEVQTDKKSVTAQELDIKARNFLINKKNLYEFNSSPYETGYIKFIENNGNTFWYDMMPAPGDKFDQSKYLMMYNDNKTVDSKSVKIEVHLTT---
General information:
TITO was launched using:
RESULT:
Template:
1UNS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37860 for 1816 contacts (-20.8/contact) +
2D Compatibility (PS) -26048 + (NN) -16042 + (LL) 3180
1D Compatibility (HY) -31600 + (ID) 11600
Total energy: -119970.0 ( -66.06 by residue)
QMean score : 0.720
(partial model without unconserved sides chains):
PDB file :
Tito_1UNS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UNS-query.scw
PDB file :
Tito_Scwrl_1UNS.pdb
: