Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNKKLLMNFFIVSPLLLATIATDFTPVPLSSNQIIKTAKASTNDNIKDLLDWYSSGSDTFTNSEVLDNSLGSMRIKNTDGSISLIIFPSPYYSPAFTKGEKVDLNTKRTKKSQHTSEGTYIHFQISGVTNTEKLPTPIELPLKVKVHGKDSPLKYWPKFDKKQLAISTLDFEIRHQLTQIHGLYRSSDKTGGYWKITMNDGSTYQSDLSKKFEYNTEKPPINIDEIKTIEAEIN
3MFG Chain:A ((4-194))
-------------------------------------------DNIKDLLDWYSSGSDTFTNSEVLDNSLGSMRIKNTDGSISLIIFPSPYYSPAFTKGEKVDLNTKRTKKSQHTSEGTYIHFQISGVTNTEKLPTPIELPLKVKVHGKDSPLKYWPKFDKKQLAISTLDFEIRHQLTQIHGLYRSSDKTGGYWKITMNDGSTYQSDLSKKFEYNTEKPPINIDEIKTIEAEIN
General information:
TITO was launched using:
RESULT:
Template:
3MFG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34066 for 1412 contacts (-24.1/contact) +
2D Compatibility (PS) -20115 + (NN) -7983 + (LL) 3352
1D Compatibility (HY) -23200 + (ID) 9550
Total energy: -91562.0 ( -64.85 by residue)
QMean score : 0.659
(partial model without unconserved sides chains):
PDB file :
Tito_3MFG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MFG-query.scw
PDB file :
Tito_Scwrl_3MFG.pdb
: