Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSDKYYRSAYMNVDLNAVASNFKVFSTLHPNKT-VMAVVKANAYGLGSVKVARHLMENGATFFAVATLDEAIELRMHGITAKILVLGVLPAKDIDKAIQHRVALTVPSKQWLKEAIKNISGEQEKKLWLHIKLDTGMGRLGIKDTNTYQEVIEIIQQYEQLVFEGVFTHFACADEPGDMTTEQYQRFKDMVNE-AIKPEYIHCQNSAGSLLMDCQFCNAIRPGISLYGYYPSEYVQQKVKVHLKPSVQLIANVVQTKTLQAGESVSYGATYTATDPTTIALLPIGYADGYLRIMQGSFVNVNGHQCEVIGRVCMDQTIVKVPDQVKAGDSVILIDNHRESPQSVEVVAEKQHTINYEVLCNLSRRLPRIYHDGDQRFVTNELLK |
| 4ILS Chain:A ((2-368)) | --NDFHRDTWAEVDLDAIYDNVENLRRLLPDDTHIMASVCGNAYGHGDVQVARTALEAGASRLAVAFLDEALALREKGIEAPILVTGASRPADAALAAQQRIALTVFRSDWLEEASALYSGP--FPIHFHLYMDTGMG---VKDEEETKRIVALIERHPHFVLEGLWTWF-----------YQYTRFLHMLEWLPSRPPLVFCAN---SLR---RTFNMVQFGIAMYGLA----------YPLKEAFSLHSRLVHVKKLQPGEKVSYGATYTAQTEEWIGTIPIGYKDGWLRRLQHFHVLVDGQKAPIVGRILMDMCMIRLPGPLPVGTKVTLIGRQGDKVISIDDVARHLETINYEVPCTISYRVPRIF-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ILS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -273338 for 2723 contacts (-100.4/contact) +
2D Compatibility (PS) -35852 + (NN) -6563 + (LL) 2472
1D Compatibility (HY) -28800 + (ID) 6900
Total energy: -348981.0 ( -128.16 by residue)
QMean score : 0.560
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