Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRPEKIQNVVKLLSSLGVNIKKTKSRLDIINTLPASNKVSHELK
1RF6 Chain:A ((45-71))
---GEDVLSTMQVFRDLGVEIEDKDGVITV---------------
General information:
TITO was launched using:
RESULT:
Template:
1RF6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6059 for 113 contacts (-53.6/contact) +
2D Compatibility (PS) -2928 + (NN) -1507 + (LL) 1236
1D Compatibility (HY) -3200 + (ID) 250
Total energy: -12708.0 ( -112.46 by residue)
QMean score : 0.677
(partial model without unconserved sides chains):
PDB file :
Tito_1RF6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1RF6-query.scw
PDB file :
Tito_Scwrl_1RF6.pdb
: