Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYETYHSGWIECITGSMFSGKSEELIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAINISKASEIMTHNLTNVDVIGIDEVQFFDDEIVSIVEKLSADGHRVIVAGLDMDFRGEPFEPMPKLMAVSEQVTKLQAVCAVCGSSSSRTQRLINGKPAKIDDPIILVGANESYEPRCRAHHIVAPSDNNKEEL
2QQ0 Chain:A ((2-174))
------SGKLTVITGPMYSGKTTELLSFVEIYKLGKKKVAVFKPK-------TMIVSH----VEAHVIERPEEMRKYIEEDTRGVFIDEVQFFNPSLFEVVKDLLDRGIDVFCAGLDLTHKQNPFETTALLLSLADTVIKKKAVCHRCGEYNATLTLKVAGGEEEID-----VGGQEKYIAVCR---------------
General information:
TITO was launched using:
RESULT:
Template:
2QQ0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78459 for 1284 contacts (-61.1/contact) +
2D Compatibility (PS) -17278 + (NN) -3867 + (LL) 1940
1D Compatibility (HY) -12800 + (ID) 3000
Total energy: -113464.0 ( -88.37 by residue)
QMean score : 0.577
(partial model without unconserved sides chains):
PDB file :
Tito_2QQ0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QQ0-query.scw
PDB file :
Tito_Scwrl_2QQ0.pdb
: