Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSEQYSEINTDTLERVTEIFKALGDYNRIRIMELLSVSEASVGHISHQLNLSQSNVSHQLKLLKSVHLVKAKRQGQSMIYSLDDIHVATMLKQAIHHANHPKESGL
1R22 Chain:A ((28-117))
-------IAPEVAQSLAEFFAVLADPNRLRLLSLLARSELSVGDLAQAIGVSESAVSHQLRSLRNLRLVSYR----HVYYQLQDHHIVALYQNALDH---------
General information:
TITO was launched using:
RESULT:
Template:
1R22.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50215 for 555 contacts (-90.5/contact) +
2D Compatibility (PS) -8996 + (NN) -2555 + (LL) 852
1D Compatibility (HY) -9200 + (ID) 1550
Total energy: -71664.0 ( -129.12 by residue)
QMean score : 0.552
(partial model without unconserved sides chains):
PDB file :
Tito_1R22.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1R22-query.scw
PDB file :
Tito_Scwrl_1R22.pdb
: