Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDFSNFFQNLSTLKIVTSILDLLIVWYVLYLLITVFKGTKAIQLLKGILVIVIGQQISMILNLTATSKLFDIVIQWGVLALIVIFQPEIRRALEQLGRGSFLKRYTSNTYSKDEEKLIQSVSKAVQYMAKRRIGALI-VFEKETGLQDYIETGIAMDSNISQELLINVFIPNTPLHDGAMIIQG--TKIAAAASYLPLSDSPKISKSLGTRHRAAVGISEVSDAFTVIVSEETGDISVTFDGKLRRDISNEIFEELLAEHWFGTRFQKKGVK |
| 4YVZ Chain:A ((46-157)) | --------------------------------------------------------------------------------------------------------------------------KALDDIINANFGALIFLVDDPKKYEDVIQGGFWLDTDFSAEKLYEL-----SKMDGAIVLSEDITKIYYANVHL-VPDPTIPTGETGTRHRTAERLAKQTGKVVIAVSRRRNIISLYY-------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4YVZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -71068 for 794 contacts (-89.5/contact) +
2D Compatibility (PS) -11886 + (NN) -2996 + (LL) 14192
1D Compatibility (HY) -8000 + (ID) 1600
Total energy: -81358.0 ( -102.47 by residue)
QMean score : 0.373
|
|
|