Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKTL-PEDFIFGGATAAYQAEGATNTDGKGRVAWDTYLE-----ENYWYTAEPASDFYNRYPVDLELSEKFGVNGIRISIAWSRIFPNGYGEVNPKGVEYYHKLFAECHKRHVEPFVTLHHFDTPEVLHKDGDFLNRKTIDYFVDYAEYCFKEFPE-VKYWTTFNEIGPIGDGQYLVGKFPPGIKYDFEKVFQSHHNMMVAHARAVKLFKDGGYQGEIGVVHALPTKYPFDPSNPEDVRAAELEDIIHNKFILDATYLGKYSRETMEGVQHILSVNGGKLNITDEDYAILDAAKDLNDFLGINYYMSDWMRGYDGESEITHNATGDKGGSKYQLKGVGQREFDVDVPRTDWDWMIYPQGLYDQIMRVVKDYPNYHKIYITENGLGYKDEFIESEKTVHDDARIDYVRQHLNVIADAIKDGANVKGYFIWSLMDVFSWSNGYEKRYGLFYVDFET-QERYPKKSAYWYKELAETKEIK |
| 4PTW Chain:A ((5-449)) | ---IIFPEDFIWGAATSSYQIEGAFNEDGKGESIWDRFSHTPGKIEN-GDTGDIACDHYHLYREDIELMKEIGIRSYRFSTSWPRILPEGKGRVNQKGLDFYKRLVDNLLKANIRPMITLYHWDLPQALQDKGGWTNRDTAKYFAEYARLMFEEFNGLVDLWVTHNEPWVVAFEGHAFGNHAPGTK-DFKTALQVAHHLLLSHGMAVDIFREEDLPGEIGITLNLTPAYPAGDSE-KDVKAASLLDDYINAWFLSPVFKGSYPEE----LHHIYEQNLGAFTTQPGDMDII--SRDI-DFLGINYYSRMVVRHKPGDNLFNAEVVKME-----------------DRPSTEMGWEIYPQGLYDILVRVNKEYTD-KPLYITENGAAFDDKLTE-EGKIHDEKRINYLGDHFKQAYKALKDGVPLRGYYVWSLMDNFEWAYGYSKRFGLIYVDYENGNRRFLKDSALWYREVIEKGQV- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PTW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -201125 for 3871 contacts (-52.0/contact) +
2D Compatibility (PS) -46423 + (NN) -15203 + (LL) 1240
1D Compatibility (HY) -35600 + (ID) 8950
Total energy: -306061.0 ( -79.07 by residue)
QMean score : 0.694
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