Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTIGIDKINFYVPKYYVDMAKLAEARQVDPNKFLIGIGQTEMAVSPVNQDIVSMGANAAKDIITDE--DKKKIGMVIVATESAVDAAKAAAVQIHNLLGIQPFARC-------FEMKEACYAATPAIQLAKDYLATRP--NEKVLVIATDTARYGLNSGGEPTQGAGAVAMVIAHNPSILALNEDAVAYTEDVYDFWRPT-GHKYPLVDGALSKDAYIRSFQQSW----NEYAKRQGK--SLADFASLCFHVPFTKMGKKALESIIDN------------------------ADETTQER--------LRSGYEDA-----VDYNRYVGNIYTGSLYLSLISLLENR--DLQAGETIGLFSYGSGSVGEFYSATLVEGYKDHLDQAAHKALLNNRTEVSVDAYETFFKRFDDVEFDEEQDAVHEDRHIFYLSNIENNVREYHRPE |
| 2F82 Chain:A ((5-372)) | --VGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQDCLAFCTELEDVISMSFNAVTSLLEKYKIDPKQIGRLEVGSETVIDKSKS----IKTFL-MQLFEKCGNTDVEGVDSTNACYGGTAALLNCVNWVESNSWDGRYGLVICTDSAVYA-EGPARPTGGAAAIAMLIGPDAPIVFESKLRGSHMAHVYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKHLCNKFEKLEGKEFSINDADYFVFHSPYNKLVQKSFARLLYNDFLRNASSIDEAAKEKFTPYSSLSLDESYQSRDLEKVSQQLAKTYYDAKVQPTTLVPKQVGNMYTASLYAAFASLVHNKHSDL-AGKRVVMFSYGSGSTATMFSLRLCE-------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2F82.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -172170 for 2644 contacts (-65.1/contact) +
2D Compatibility (PS) -33398 + (NN) -9401 + (LL) 5620
1D Compatibility (HY) -26800 + (ID) 5450
Total energy: -241599.0 ( -91.38 by residue)
QMean score : 0.483
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