Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTKIKIMSVRDEDMPYIKAWAEKHHVEVDITKEALTDDNVEGVAGYDGLSLSQQIPLSE-HVYKRLNELGIKQIAQRSAGFDTYDLELANKYNLIVSNVPSYSPNSIAEFAVNQAINVVRHFNQIQTKVREHDFRWEPTILSKSIKDLKVAVIGTGRIGRVVADIFANGYQSDVVAYDPFPNAKIATYVDYKDTIEEAVEGADIVTLHVPATKYNHYLFNAELFKHFKKGAVFVNCARGSLVDTKALLDALDNGVIKGAALDTYEFERKLFPSDQRGKTPNDPLLESLIDREDVILTPHIAFYTEAAVKNLIVDALDATLDVLQTGDTRLRVN |
4XKJ Chain:A ((2-329)) | --KIIMFSVRDDEEAAIREWEKKTGVQVDINRLELDAETAQLTKGYDGIVIQQRSHISNPAVYETLQKNGLRQLTSRTAGYDMIDLEQASERGLVVTNVPAYSPNSVAELALTQTMRLIRNLPLFDARGAEQDFRW-AGLMAREIRSLTVGIIGAGRIGGTVARLF-KALGATVIANDIVERVELKDIVTYVSK-EELLQAADVVTLHVPLMDSTTQLIDADALALMKNDAVLINASRGPVVDTDALIAALQNKQIAGAALDTLNGEEHFFNQDLCGKELPSEQLKVLRTLPNVLITPHIGFYTNKAVQNMVEISLNDVLAILKTGTSEHQLN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XKJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -201867 for 2705 contacts (-74.6/contact) +
2D Compatibility (PS) -35428 + (NN) -16451 + (LL) 712
1D Compatibility (HY) -29200 + (ID) 6350
Total energy: -288584.0 ( -106.69 by residue)
QMean score : 0.534
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