Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMTSIKTITPKDFIFRVLSGVAIGIVAGLVPNAILGEIFKYFMDYHPIFKTLLGVVVAIQFTVPALIGALVAMKFDLSPLAIAVVASAAYVGSGAAQFKNGAWMITGIGDLINTMITAAIAVLFILLIQHRVGSMALIVFPTVVGGISGAIGVLILPYTKMITTAIGNMVNGFTELQPIVMSILISMVFSLIIISPLSTVAIAFAIGITGLAAGSASIGISATEAVLIIGTSKVNRLGVPLSVFFGGVKMMIPNMVKYPILMLPILTTAIVSGLVSALVGIHGTKESAGFGFIGMVGPINAFKFMEVDSAWLSVLLIVVAFFVVPFVTAWLADIIYRKVFRLYTNDIFKFMG
3VGA Chain:A ((54-138))----------------------------------------------------------------------------------------------------------------------------------------------------AVGVLAIPFAITISTGFCAACHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVL-----------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3VGA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -44254 for 400 contacts (-110.6/contact) +
2D Compatibility (PS) -7761 + (NN) 3478 + (LL) 23460
1D Compatibility (HY) -7600 + (ID) 1200
Total energy: -33877.0 ( -84.69 by residue)
QMean score : -0.187

(partial model without unconserved sides chains):
PDB file : Tito_3VGA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3VGA-query.scw
PDB file : Tito_Scwrl_3VGA.pdb: