Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHAKTITYYTVPHAPAQDIVVKGYEDVTNTFDVIIIAVKTHQLDAVIPHLTYLAHEDTLIILAQNGYGQLEHIPFKNVCQAVVYI----SGQKKGDVVTHFRDYQLRI----QDNALTRQFRDLVQDSQIDIVLEANIQQAIWYKLLVNLGINSITALGR-QTVAIMHNP-EIRILCRQLLLDGCRVAQAEGLNFS-EQTVDTIMTIYQGYPDEMGTSMYYDIVHQQPLEVEAIQGFIYRRAREHNLDTPYLDTIYSFLRAYQQNM |
| 1YON Chain:A ((59-286)) | --------------------------------------------------------DFLATSDLLLVTLKAWQVSDAVKSLASTLPVTTPILLIHNGMGTIEEL--QNIQQPLLMGTTTHAARRDGNVIIHVANGITHIGPARQQDGDYSYLADILQTVLPDVAWHNNIRAELWRKLAVNCVINPLTAIWNCPNGELRHHPQEIMQICEEV----AAVIEREGHHTSAEDLRDYVMQVIDATAENI-SSMLQDIRALRHTEIDYINGFLLRRARAHGIAVPENTRLFEMVK------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YON.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -179525 for 1672 contacts (-107.4/contact) +
2D Compatibility (PS) -22594 + (NN) -142 + (LL) 4596
1D Compatibility (HY) -13600 + (ID) 3000
Total energy: -214265.0 ( -128.15 by residue)
QMean score : 0.442
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