Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKTFGKKVVLIGDGSVGSSYAFAMVTQGVADEFVIIDIAKDKVKADVQDLNHGTVHSPSPVDVKAGEYEDCKDADLVVITAGAPQKPGETRLQLVEKNTKIMKSIVKSVMDSGFDGYFLIAANPVDILTRFVKEYTGLPAERVIGSGTVLDSARLQYLISQELGVAPSSVDASIIGEHGDTELAVWSQANVAGISVYDTL--KEQTGSEAKAEEIYVNTRDAAYEIIQAKGSTYYGIALALMRISKAILNNENNVLNVSIQLDGQYGGHKGVYLGVPTLVNQHGAVKIYEMPLSAEEQALFDKSVKILEDTFDSIKYLLED
4LMR Chain:A ((29-331))------RVVLVGTGAVGCSYAYCMINQAVAEEFVLVDVNEAKAEGEAMDLSHAVPFAPAPTRVWKGSYEDCKDADLVVITAGLPQKPGETRLDLVEKNAKIFKQIVRSIMDSGFDGIFLIATNPVDILTYVTWKESGLPKERVIGSGTTLDSARFRYMLGEYFDIGPHNIHAYIIGEHGDTELPVWSHVSV-GIQKLQTLLEKDNTYNQEDLDKIFINVRDAAYHIIERKGATYYGIGMSLLRVTKAILNDENSVLTVSAYLEGQY-GQKDVYIGVPAVLNRGGVREILEVELSEDEELKFDHSVQVLKET----------


General information:
TITO was launched using:
RESULT:

Template: 4LMR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -195815 for 2604 contacts (-75.2/contact) +
2D Compatibility (PS) -32681 + (NN) -12178 + (LL) 1088
1D Compatibility (HY) -33600 + (ID) 8550
Total energy: -281736.0 ( -108.19 by residue)
QMean score : 0.679

(partial model without unconserved sides chains):
PDB file : Tito_4LMR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4LMR-query.scw
PDB file : Tito_Scwrl_4LMR.pdb: