Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTNTRRSTSSLIVHEQPKSPISEKFRGIRSNIMFANPDSAVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGDMRKPTQHYIFNLPNNE-GLSSLLLNWSTYQDSIISTEIQDLDVLTSGPIPPNPSELITSRAFANLYDTLLMNYNFVIIDTPPVNTVTDAQLFSKFTG-NVVYVVNSENNNKDEVKKGKELIEATGAKLLGVVLNRMPKDKSASYYAYYGTDES
1G3R Chain:A ((5-172))
-------------------------------------------ISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDLTMANLSLVLGVDDPDVTLHDVLAGEANVEDAIYMTQFDNVYVL-PGAVDWEHVLKADPRKLPEVIKSLKDKFDFILIDC-PAGLQLDA-MSAMLSGEEALLVTNPEISCLTDTMKVGIVLKKAGLAILGFVLNR------------------
General information:
TITO was launched using:
RESULT:
Template:
1G3R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -80010 for 1423 contacts (-56.2/contact) +
2D Compatibility (PS) -17990 + (NN) -8350 + (LL) 3020
1D Compatibility (HY) -12000 + (ID) 2350
Total energy: -117680.0 ( -82.70 by residue)
QMean score : 0.564
(partial model without unconserved sides chains):
PDB file :
Tito_1G3R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1G3R-query.scw
PDB file :
Tito_Scwrl_1G3R.pdb
: