Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIELWPAIDLIGSTSVRLTEGKYDSEEKMSRSAEESIAYYSQFECVNRIHIVDLIGAKAQYAREFDYIKSLRRLTTKDIEVGGGIRTKSQIMDYFAAGINYCIVGTKGIQDTDWLKEMAHTFPGRIYLSVDAYGEDIKVNGWEEDTELNLFSFVRQLSDIPLGGIIYTDIAKDGKMSGPNFELTGQLVKATTIPVIASGGIRHQQDIQRLASL---NVHAAIIGKAAHQASFWEGLE
4W9T Chain:A ((9-235))
-LELLPAVDVRDGQAVRLVHGVSGSETSYGSPLEAALAW--QASGAEWLHLVDLDAAFGT-GDNRALVAEITGAMDIKVELSGGIRDDASLAAALATGCTRVNLGTAALETPEWAAKAIAEHGDRIAVGLDVRGTTLKGR-----GG-DLYETLARLDSEGCARYVVTDIGKDGTLTGPNLELLKNVCAATDRPVVASGGISSLEDLRALAALVPQGVEGAIVGKALYAKAF-----
General information:
TITO was launched using:
RESULT:
Template:
4W9T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -105365 for 1924 contacts (-54.8/contact) +
2D Compatibility (PS) -23601 + (NN) -7931 + (LL) 1024
1D Compatibility (HY) -13600 + (ID) 3350
Total energy: -152823.0 ( -79.43 by residue)
QMean score : 0.491
(partial model without unconserved sides chains):
PDB file :
Tito_4W9T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4W9T-query.scw
PDB file :
Tito_Scwrl_4W9T.pdb
: