Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDKKTIYFICTGNSCRSQMAEGWGKEILGEGWNVYSAGIETHGVNPKAIEAMKEVDIDISNHTSDLIDNDILKQSDLVVTLCSDADNNCPILPPNVKKEHWGFDDPAGKEWSEFQRVRDEIKLAIEKFKLR
1RXI Chain:A ((1-131))
MDKKTIYFISTGNSARSQMAEGWGKEILGEGWNVYSAGIETHGVNPKAIEAMKEVDIDISNHTSDLIDNDILKQSDLVVTLSSDADNNCPILPPNVKKEHWGFDDPAGKEWSEFQRVRDEIKLAIEKFKLR
General information:
TITO was launched using:
RESULT:
Template:
1RXI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51374 for 1062 contacts (-48.4/contact) +
2D Compatibility (PS) -14512 + (NN) -7778 + (LL) 0
1D Compatibility (HY) -15200 + (ID) 6400
Total energy: -95264.0 ( -89.70 by residue)
QMean score : 0.722
(partial model without unconserved sides chains):
PDB file :
Tito_1RXI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1RXI-query.scw
PDB file :
Tito_Scwrl_1RXI.pdb
: