Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQLCVALDLEKKEDNLSLLQELKGLDLWAKVGLRSFIRDGATFLDEIRKIDGNFKIFLDLKLYDIPYTMANAALECAKLDIDMLTVHLSSAKSALTILMQRLNAL----KKRPLIMGVSALTSFSE----EEFLMVYNAPLKTQAITLSAIGKESGIDGVVCSVFESLAIKEALGKGFLTLTPGIRLDKNDKEDQERVANAKEAKQNLSDFIVVGRPIYQAKEPREVVLELLKDC
2YYT Chain:A ((9-224))
----VALDFPSKQEVERFLRPFAGTPLFVKVGMELYYQEGPAIVAFLK--EQGHAVFLDLKLHDIPNTVKQAMKGLARVGADLVNVHAAGGRRMMEAAIEGLDAGTPSGRMRPRCIAVTQLTSTDERMLHEELWI--SRPLVETVAHYAALAKESGLDGVVCSANEAAFIKERCGASFLAVT----------------VTPRKARALGSDYIVIGRSLTRAADPLRTYARLQHEW
General information:
TITO was launched using:
RESULT:
Template:
2YYT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -122772 for 1537 contacts (-79.9/contact) +
2D Compatibility (PS) -20912 + (NN) -8797 + (LL) 1720
1D Compatibility (HY) -14000 + (ID) 3400
Total energy: -168161.0 ( -109.41 by residue)
QMean score : 0.563
(partial model without unconserved sides chains):
PDB file :
Tito_2YYT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2YYT-query.scw
PDB file :
Tito_Scwrl_2YYT.pdb
: