Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKFLFKQKFCESLPKSFSKTLLALSLGLILLGVFIPFPKVPKHQSVPLALHFTEHYARFIPTILSVAIPLIQRDAVGLFQVANASIATTFLTHATKRALNHVTINDQRLGERPYGGNFNMPSGHSSMVGLAVAFLMRRYSVKKYLWLLPLIPLTMLARIYLDMHTIGAVLAGLGTGMLCVGLFTSPKNLN |
2LX0 Chain:A ((2-15)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------KHTIWEVIAGLVALLTFLAFGFWLFKYL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LX0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5781 for 61 contacts (-94.8/contact) +
2D Compatibility (PS) -1434 + (NN) 698 + (LL) 13000
1D Compatibility (HY) -1200 + (ID) 350
Total energy: 4933.0 ( 80.87 by residue)
QMean score : -0.317
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