Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRKVLYALMGFLLVFSALKADDFLEEANETAPANLNHPMQDLNAIQGSFFDKNRSKMSNTLNIDYFQGQTYKIRLRYAMATLLFFSKPISDFVLGDKVGFDAKILESNDRILLIKPLQIGVDSNISVIDSEGKIFSFYVFSTTFTSSKHPNLQVFIEDKNYYTNAFIKPQKENQENMSENAPKDAQKNNKPLKEEKEETKEKEEETIIIGDNTNAMKIIKKDIQKGYKALKSSQRKWYCLWACSKKSKLSLMPKEIFNDKQFTYFKFDKRLALSKFPVIYKVVDGYDNPVNTRIVGDYIIAEDVSTKWTLRLGKDYLCIRFVKRRKGE |
| 3E80 Chain:A ((589-668)) | --------------------------------------------------------------------------------------------------------------------LPDAANSNITSIGGKGK--DFWVFGTNYTNDPKPGTDEALERGEWRVE--ITPKKAAAEDYYLNVIQIADNTQQKLHEVKRIDGDKVVGVQLADRIVTFSKTSETVDRPFGFSVVGKGTFKFVMTDLLPGTWQVLKDGKILYPALSAKGDDGALYFEGTEGTYRFLR--------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3E80.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 23743 for 309 contacts (76.8/contact) +
2D Compatibility (PS) -7893 + (NN) 4386 + (LL) 12596
1D Compatibility (HY) 4000 + (ID) 200
Total energy: 36632.0 ( 118.55 by residue)
QMean score : 0.256
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