Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDSVTLACGNGGKETNALIERVFMPYLKEWIVAFDEDAPKFEASGEYCVSTDSFVITPLIFNGGDIGKLCVCGSANDVSVQGGEPLYLNMGFILEEGLEIPLLKQILQSIQKELFKANLKLLSLDTKVVPKGSVDK--LFINTTCIGKIIKPGISSRHLQQGQAIILSDTIANHGASLFATRHEIKLKTNLQSDCQLLYPLLKPL--FLSDLKIDALRDATRGGLASVLNEWANSSRVKIVIEEEKIPLKEETKGICEILGLEPYALANEGVFVLALNQKDAPKALEILKSNEKAKNACVIGGVFENPYPSVVLKNAWGFERILEMPEGELLPRIC
3VYT Chain:C ((40-338))--------------------------------ALDDGATIPFGDKHIVFTIDGHTVKPLFFPGGDIGRLAVSGTVNDLAVMGAEPIALANSMIIGEGLDMEVLKRVLKSMDETAREVPVPIVTGDTKVVE----DKIEMFVITAGIGIAEHP-VSDAGAKVGDAVLVSGTIGDHGIALMSHREGIAFETELKSDVAPIWDVVKAVAETIGWENIHAMKDPTRAGLSNALNEIARKSNVGILVREADIPIRPEVRAASEMLGISPYDVANEGKVVMVVAREYAEEALEAMRKTEKGRNAAIIGEVIADYRGKVLLETGIGGKRFMEPPEGDPVPRIC


General information:
TITO was launched using:
RESULT:

Template: 3VYT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -192223 for 2670 contacts (-72.0/contact) +
2D Compatibility (PS) -31162 + (NN) -8288 + (LL) 2260
1D Compatibility (HY) -23600 + (ID) 5450
Total energy: -258463.0 ( -96.80 by residue)
QMean score : 0.416

(partial model without unconserved sides chains):
PDB file : Tito_3VYT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3VYT-query.scw
PDB file : Tito_Scwrl_3VYT.pdb: