Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIQIHHANAFEIIKDFHQQNLKVDAIITDPPYNISVKNNFSTLKSAKRQGIDFGEWDKNFKLLEWIARYASLINPNGCMVIFCSYRFISYIADFLEENGFVVKDFIQWVKNNPMPRNIHRRYVQDTEFALWAVKKKAKWVFNKPKNEKYLRPLILKSPVVSGIERVKHPTQKSLTLMEKIISTHTNPNDTVLDPFMGSGTTGLACKNLKRNFIGIESEKEYFQIAQKRLS |
1BOO Chain:A ((233-294)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------HPARFPAKLPEFFIRMLTEPDDLVVDIFGGSNTTGLVAERESRKWISFEMKPEYVAASAFRFL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1BOO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3875 for 409 contacts (-9.5/contact) +
2D Compatibility (PS) -6713 + (NN) -4544 + (LL) 12528
1D Compatibility (HY) -2800 + (ID) 1150
Total energy: -6554.0 ( -16.02 by residue)
QMean score : 0.522
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