Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLVSRFLNAIDPFNLGVLLSRFQIKNGCIYGVCSYKVSKFTPGYEESKARVLNALNILSKHQIWQSNQESVTKVKGTFVFILENDLHLDENSFYKKLLNLIIDNDFFNRSHLVTPSNGTNSHPELHRSITPREAARIQSFSDDYIFYGNKTSVCKQIGNAVPPLLALALGKAILKSARNDTNPSR
4WXX Chain:A ((1192-1243))
-------------------------------------------------------------------------------------------------------------------------HPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGLEIKLCMLAKALTRV
General information:
TITO was launched using:
RESULT:
Template:
4WXX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10678 for 270 contacts (-39.5/contact) +
2D Compatibility (PS) -5503 + (NN) -2756 + (LL) 7624
1D Compatibility (HY) -1200 + (ID) 1350
Total energy: -13863.0 ( -51.34 by residue)
QMean score : 0.339
(partial model without unconserved sides chains):
PDB file :
Tito_4WXX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4WXX-query.scw
PDB file :
Tito_Scwrl_4WXX.pdb
: