Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNYWTKLSIEYANQRSYLDDLFQVYPTIPEGLREI----DSKIWSNVEYHFKRKDNLALITELLNLDLFPIKDSYMAYLKRDKSALERNPRTINRICGRLYEMGLNKIFEKCSEPKETNRQIGPMFKDWINNKSLGVEPVDLNDFIANENDAILKASDNVMAEFAKSHLNYHHHKGLDFVARFNKKYIIGEAKFLTDFGGHQNAQFNDAINTIETPNIKAIKVAILDGVLYIESNNKMRKLLDTTYRNYHIMSALVLREFLYQI |
4MTJ Chain:A ((91-198)) | -NKWLQDELDRLNKRT--GDAFQISEESKEKLKDVFEYWNGKTTSELATSYMTEET----REAVNCDVFTVGNYYYNGVGH-----------VSVDYGKVLRVGFNGIINEAKEQLEKNRSIDPDFIKKEKFLNSVIISCEAAITYVNRYAKKAKEIADNTSDAKRKAELNEIAKICSKVSGEGAKSFYEACQLFWFIHAIINIESNGHSISPARFDQYMYPYYENDKNITDKFAQELIDCIWIKLNDINKVRDEISTKHFGGY |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MTJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -7760 for 460 contacts (-16.9/contact) +
2D Compatibility (PS) -10492 + (NN) 1720 + (LL) 1592
1D Compatibility (HY) -4800 + (ID) 1350
Total energy: -21090.0 ( -45.85 by residue)
QMean score : 0.195
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