Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKTIKNGIMIGTLGALLLSGCSSFDAQRFACLPKDHSSKDASTKKEAQYIPKGFFDPYSSNLNHWDSTF
3NLN Chain:A ((22-78))
------------LKSTLETGCTEHICMGSIMLP---------TKDQLFPLAKEFLDQYYSSIKRFGSKA
General information:
TITO was launched using:
RESULT:
Template:
3NLN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2468 for 173 contacts (14.3/contact) +
2D Compatibility (PS) -4386 + (NN) 3028 + (LL) 916
1D Compatibility (HY) -2400 + (ID) 700
Total energy: -1074.0 ( -6.21 by residue)
QMean score : 0.042
(partial model without unconserved sides chains):
PDB file :
Tito_3NLN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3NLN-query.scw
PDB file :
Tito_Scwrl_3NLN.pdb
: