Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFGKSSNDTQENPKDALKSTNFHEKHTKPTETTELVEENKALTTEKERLERENKNLTADKENLTKEKTELQKQVNELKNSKQVLEN------EKADWLREKEN--------LTKDRENLTKEKTELTEKNKVLTTEKERLATEKENLTKEKTESQKQVNELKNSKQVLENEKADLTNENTKLKTDKT---DLTEKNQRLT----TEKTELNNKITGLATEKERLAADKENLTKESRQRKPN
4RH7 Chain:A ((2026-2203))
--------------------------------------------------------SSKKKELLKRQSHLQAGVSKLNEAKALVDELNRKAGEQSVLLKTKQDEADAALQMITVSMQDASEQKTELERLKHRIAEEVVKIEERKNKIDDELKEVQPLVNE---AKLAVGNIKPESLSEIRSLRMPPDVIRDILEGVLRLMGIFDTSWVSMKSFLAKRGVREDIATFDARNISKEIRE----
General information:
TITO was launched using:
RESULT:
Template:
4RH7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 62663 for 669 contacts (93.7/contact) +
2D Compatibility (PS) -17103 + (NN) -11872 + (LL) 3144
1D Compatibility (HY) -6000 + (ID) 1950
Total energy: 28882.0 ( 43.17 by residue)
QMean score : 0.657
(partial model without unconserved sides chains):
PDB file :
Tito_4RH7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4RH7-query.scw
PDB file :
Tito_Scwrl_4RH7.pdb
: