Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLSIGGLVDDASLTKFENPTIVEFRHIKKFITEYNALDHRPFTEKNDIEVAHEAQKNAAIVKGNDLYRFFSKLKQWAGADEKQNFRDLEEDFSLESFTHCTDFNPIEIYAYCISRSINNMENGVFLKYFLSYPIKYEKHQAEKIRESFERGLKKSLPRHVFDDEKTAKTFKVELRASEPCAYAISALKSYGFFKSEKLDKPVYYGVFDFGGGTTD-----FDFGKWEKRASPKFAYKMTHFSSGGDKYLGGENLLELLAWETYAKNFQTLKEKDIVIAKPNYDRIDTQLFGSFMQNSSGVRLNLQTIASQLRPFLENLDANIIEAIEENENFEIKGFEKDFKAMLFDRNGVETECDLKVDCKELLNLLKGKIEDGVANFFAGFSKVMAENIDDQCRAFHIFLGRNVSRSALVKQAFENAKEKQLKDYHQKTSKNDFKFIIYEPLGTEKSDKQILELTGEDVSNTPAYLKPTCKTGVAFGLLESRDKAQGIEMPSISSNPVFKYDLGIEIEGKFHAKIHRDSLKPNEY
4J8F Chain:A ((181-290))--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NEPTAAAIA----YGLDRTGKGERNVL--IFDLGGGTFDVSILTIDDGIFEVKA------------TAGDTHLGGEDFDNRLV-NHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGIDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGLESDLEIDNEGVIEADTDAPQEMGDENAEITEAMMDEANEKKGAAIDALNDGELQKAIDLFTDAIKLNPRLAILYAKRASVFVKLQKPNAAIRDCDRAIEINPDSAQPYKWRGKAHRLLGHWE


General information:
TITO was launched using:
RESULT:

Template: 4J8F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16330 for 555 contacts (-29.4/contact) +
2D Compatibility (PS) -10751 + (NN) 1675 + (LL) 13720
1D Compatibility (HY) -1600 + (ID) 1850
Total energy: -15136.0 ( -27.27 by residue)
QMean score : 0.420

(partial model without unconserved sides chains):
PDB file : Tito_4J8F.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4J8F-query.scw
PDB file : Tito_Scwrl_4J8F.pdb: