Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFQTKEEWGGFDELEIRYSDKALANTNTLDIKDTQMISIALEEVEEVEVKVCCVDSQSIKVGLFKDGQLIYESEVEKL
3AGF Chain:A ((170-216))
------------EWETAHRNRALAYY----LKETNFLEAEVEETLEVYLKQCAMESTTEDIALIGLILAHDGYHPIRH
General information:
TITO was launched using:
RESULT:
Template:
3AGF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3664 for 235 contacts (15.6/contact) +
2D Compatibility (PS) -4686 + (NN) 1069 + (LL) 724
1D Compatibility (HY) -2000 + (ID) 750
Total energy: -1979.0 ( -8.42 by residue)
QMean score : -0.199
(partial model without unconserved sides chains):
PDB file :
Tito_3AGF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3AGF-query.scw
PDB file :
Tito_Scwrl_3AGF.pdb
: