Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIIERLVGNLRDLNPLDFNVDHVDLEWFETRKKIARFKTRQGKDIAIRLKDAPKLGLSQGDILFKEEKEIIAVNILDSEVIHIQAKSVAEVAKICYEIGNRHAALYYGESQFEFKTPFEKPTLALLEKLGVQNRVLSSKLDSKERLTVSMPHSEPNFKVSLASDFKVVVK
3TJA Chain:A ((1-149))
MIIERLVGNLRDLNPLDFSVDYVDLEWFETRKKIARFKTRQGKDIAIRLKDAPKLGLSQGDILFKEEKEIIAVNILDSEVIHIQAKSVAEVAKICYEIGNRHAALYYGESQFEFKTPFEKPTLALLEKLGVQNRVLSSKLDSKERLTVS---------------------
General information:
TITO was launched using:
RESULT:
Template:
3TJA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61570 for 1059 contacts (-58.1/contact) +
2D Compatibility (PS) -15553 + (NN) -2346 + (LL) 1380
1D Compatibility (HY) -21600 + (ID) 7350
Total energy: -107039.0 ( -101.08 by residue)
QMean score : 0.508
(partial model without unconserved sides chains):
PDB file :
Tito_3TJA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TJA-query.scw
PDB file :
Tito_Scwrl_3TJA.pdb
: