Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKLTPKELDKLMLHYAGELARKRKEKGIKLNYVEAVALISAHIMEEARAGKKTAAELMQEGRTLLKPDDVMDGVASMIHEVGIEAMFPDGTKLVTVHTPIEA-NGKL----------------------VPGELFLKNEDITINEGKKAVSVKVKNVGDRPVQIGSHFHFFEVNRCLDFDREKTFGKRLDIASGTAVRFEPGEEKSVELIDIGGNRRIFGFNALVDRQADNESKKIALHRAKERGFHGAKSDDNYVKTIKE |
4G7E Chain:B ((1-247)) | MKLSPREIEKLGLHNAGYLAQKRLARGLRLNYTEAVALIATQIMEFVRDGDKTVAQLMSIGRELLGRRQVLPAVPKLVESVQVEATFPDGTELVTIHDPIACENGNLELALLGSFLPVPSLDKFTANDEIPGEIIVVGGNLVLNDGRKAVILKVVNNGDRPVQVGSHYHFIELNPYLTFDRRKAYGMRLNIAAGNASRFEPGECKEVLLVSIGGNKVIRGGNAIADGPVNASNCIAAMQAVITRGFGHVEEANAAEGQTGE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4G7E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -62234 for 1523 contacts (-40.9/contact) +
2D Compatibility (PS) -24149 + (NN) -12035 + (LL) 0
1D Compatibility (HY) -20000 + (ID) 5700
Total energy: -124118.0 ( -81.50 by residue)
QMean score : 0.465
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