Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKAIKILLIMTLSLNAISVNRALFDLKDSQLKGELTPKIVDFGGYKSNTTEWGATALNYINAANGDAKKFSALVEKMRFNSGILGNFRAHAHLRQALKLQKNLKYCLKIIARDSFYSYRTGIYIPLGISLKDQKTAQKMLADLSVVGAYLKKQQENEKAQSPYYRSNNYYNSYYSPYYGMYGMYGMGMYGMYGMGMYDFYDFYDGMYGFYPNMFFMMQVQDYLMLENYMYALDQEEILDHDASINQLDTPTDDDRDDKDDKSSQPANLMSFYRDPKFSKDIQTNRLNSALVNLDNSHMLKDNSLFHTKAMPTKSVDAITSQAKELNHLVGQIKEMKQDGASPNKIDSVVNKAMEVRDKLDNNLNQLDNDLKDQKGLSSEQQAQVDKALDSVQQLSHSSDVVGNYLDGSLKIDGDDRDDLNDAINNPMQQPAQQTPINNMDNTHANDSKDQGGNALINPNNATNDDHNDDHMDTNTTDTSNANDTPTDDKDASGNNTGDMNNTDTGNTDTGNTDTGNTDDMSNMNNGNDDTGNTNDDMGNSNDMGDDMNNANDMNDDMGNSNDDMGDMGDMNDDMGGDMGDMGDMGGDMGN |
3NZT Chain:A ((81-138)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TKPHDSIDKAIGELYQLSAFTLDNMHSDEIILNTSMPLSANDNDIQEADFGSSNSGRMKRVYRKGLSARYGKIMQIISGIHYNFSFDKDLISNIATNKQVSISDIYFDVLNNYFEFMWLLPYLFGASPICAKTSVKNKPDYLSVLDDKF |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NZT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 9716 for 215 contacts (45.2/contact) +
2D Compatibility (PS) -6404 + (NN) -5041 + (LL) 24944
1D Compatibility (HY) -1600 + (ID) 850
Total energy: 20765.0 ( 96.58 by residue)
QMean score : 0.203
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