Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKTAKVNDIVRDWVVLDAKDKVFGRLITEIAVLLRGKHRPFYTPNVDCGDFVVVINANKVKFSGMKLEDKEYFTHSGYFGSTKSKTLQEMLEKTPEKLYHLAVRGMLPKTKLGKAMIKKLKVYRDDKHPHTAQTSKKDAK
3J5L Chain:J ((3-138))
-TFTAKPETVKRDWYVVDATGKTLGRLATELARRLRGKHKAEYTPHVDTGDYIIVLNADKVAVTGNKRTDKVYYHHTGHIGGIKQATFEEMIARRPERVIEIAVKGMLPKGPLGRAMFRKLKVYAGNEHNHAAQQPQVLDI
General information:
TITO was launched using:
RESULT:
Template:
3J5L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55379 for 951 contacts (-58.2/contact) +
2D Compatibility (PS) -15176 + (NN) -8674 + (LL) 208
1D Compatibility (HY) -10000 + (ID) 3400
Total energy: -92421.0 ( -97.18 by residue)
QMean score : 0.533
(partial model without unconserved sides chains):
PDB file :
Tito_3J5L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3J5L-query.scw
PDB file :
Tito_Scwrl_3J5L.pdb
: