Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQKIGILGAMREEITPILELFGVDFEEIPLGGNVFHKGVYHNKEIIVAYSKIGKVHSTLTTTSMILAFGVQKVLFSGVAGSLVKDLKINDLLVATQLVQHDVDLSAFDHPLGFIPESAIFIETSGSLNALAKKIANEQHIALKEGVIASGDQFVHSKERKEFLVSEFKASAVEMEGASVAFVCQKFGVPCCVLRSISDNADEKAGMSFDEFLEKSAHTSAKFLKSMVDEL
4OY3 Chain:A ((3-231))
-QKIGILGAMREEITPILELFGVDFEEIPLGGNVFHKGVYHNKEIIVAYSKIGKVHSTLTTTSMILAFGVQKVLFSGVAGSLVKDLKINDLLVATQLVQHDVDLSAFDHPLGFIPESAIFIETSGSLNALAKKIANEQHIALKEGVIASGDQFVHSKERKEFLVSEFKASAVEMEGASVAFVCQKFGVPCCVLRSISNNADEKAGMSFDEFLEKSAHTSAKFLKSMVDEL
General information:
TITO was launched using:
RESULT:
Template:
4OY3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -171083 for 2060 contacts (-83.0/contact) +
2D Compatibility (PS) -24072 + (NN) -3923 + (LL) 208
1D Compatibility (HY) -34400 + (ID) 11400
Total energy: -244670.0 ( -118.77 by residue)
QMean score : 0.508
(partial model without unconserved sides chains):
PDB file :
Tito_4OY3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4OY3-query.scw
PDB file :
Tito_Scwrl_4OY3.pdb
: